They DO clear the Dragon nicely, and disapear quickly into the darkness of space... But they comeback half an orbit later!

Thanks for prompting me to look into this previously neglected aspect of the Cargo Dragon add-on.
I suspect my initial thoughts echoed DaveS, in as much as: jettison->extra velocity->different orbit period->no impact.
But actually, if the jettison velocity is orthogonal to the Dragon's velocity vector (especially prograde/level horizon attitude) you don't change the orbit period by much at all.
I tried some experiments in Orbiter, starting from the CRS-14 launch scenario orbit of 300km x 350km, jettisoning the solar panel covers about 1min after orbit insertion at 300km.
Prograde/Level Horizon attitude at jettison gave the closest panel/Dragon passes.
With "Non-spherical gravity" and "Atmospheric Wind Effects"
enabled,
the close approach after 1/2 orbit was ~1000m, closest approach after 1 orbit was ~100m.
With "Non-spherical gravity" and "Atmospheric Wind Effects"
disabled,
Close approach after 1/2 orbit was ~1000m, closest approach after 1 orbit was ~2m. !! .
That's a bit close, although I suspect the Dragon does some orbit raise maneuvre before then.
However, the add-on panel covers don't have particularly realistic aerodynamics in the .cfg file (I never thought about it!). If you give them some drag and reduce the mass a bit, they start to behave better.
If you use the following parameters in the Config/Vessels/dragon1/dragon1_fairing1.cfg (also dragon1_fairing2.cfg), the atmospheric drag keeps the closest approach down to ~600m after 1/2 orbit, after that distance continues to increase. The covers' orbit loses about 20km per day (ran it for 24hrs sim time), so I guess that's somewhere in the "reentry after a few days" ballpark.
Code:
Mass = 25
CrossSections = 4 4 4
CW = 5 5 5
Anyway, I'll include something like that in the next update.
Cheers,
BrianJ
P.S. Here's a video(not mine) that shows really well what I saw from UK South Coast when CRS-11 passed over. To me, it looked like the panel covers were indeed jettisoned from Prograde/Level Horizon attitude, but hard to tell really.
[ame="https://www.youtube.com/watch?v=7Qw-w31TVAE"]Dragon Resupply Mission CRS 11 - YouTube[/ame]