Well, there are several problems my uneducated mind can sense in that regard:
1. In Earth's oceans, phytoplankton (basically the basis of the aquatic food chain) are fertilised by minerals that are fed into the oceans via rivers and dust storms. I'm not sure if volcanic action contributes to this, or if undersea volcanic action contributes to this, or if there's a cutoff point below a certain depth that doesn't inject sizable amounts of nutrients into the water.
2. When an organism, be it a phytoplankton or a aquamarinexenoshark dies, its carcass- and biomass- would fall into the abyss, never to be seen by the upper layers of the ocean again. If you have a substrate in these upper layers of ocean (the "euphotic zone"), then detrivores can recycle the biomass back into the ecosystem. On Earth, biomass that falls to the abyssal plain is eventually subducted back into the mantle, and potentially partially replenished into the ecosystem by volcanic eruptions. On an ocean world, the problem could be biomass continually sinking to the abyss.
3. A world-ocean could be so deep, that the seafloor would have enourmous pressures- potentially pressures high enough to create odd allotropes of ice. This might be problematic for organisms originating from or living on the deep seafloor, subsisting off of chemicals from hydrothermal vents, for example.
4. From our knowledge, a substrate (seafloor) in the euphotic zone played a large role in the evolution of complex life. It seems that the
Ediacara biota were (extremely odd and unclear in terms of relation to living animals) benthos, feeding off of abundant bacterial mats. Later in the
Cambrian period, where the early ancestors and relatives of modern animal phyla are recognisable, benthic animals clearly played an important role (though their abundance as fossils probably also has a lot to do with fossilisation bias).
.